CDS
| Accession Number | TCMCG007C58359 |
| gbkey | CDS |
| Protein Id | XP_009117403.1 |
| Location | join(40003864..40003971,40004058..40004118,40004205..40004241,40004332..40004462,40004560..40004655,40004743..40004854,40004995..40005128,40005826..40005965,40006056..40006106,40006198..40006280,40006363..40006417,40006497..40006611,40006805..40007327,40007447..40007660,40007747..40007817,40007903..40008071,40008152..40008281,40008373..40009061) |
| Gene | LOC103842525 |
| GeneID | 103842525 |
| Organism | Brassica rapa |
Protein
| Length | 972aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009119155.3 |
| Definition | RNA-binding protein 28 isoform X2 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGAAGAACACGAAGAAAGAGAGGAAAGATGGAGAAGAAAAATCTCAACACTCTGCTGCCACTGTGTGCGTCTCTGGCTTGCCTTATTCCTTCACCAACGCTCAGCTCGAAGAAGCCTTTAGCGACGTTGGTCCCGTCAGGCTTTGCTTCATGGTCACAAACAAAGGATCAAACGAACATCGTGGCTTTGCTTTTGTTAAATTTGCTTTGCCAGAAGATGCTAACCGTGCCATTGAGCTGAAGAACGGTTCTACTGTTGGCGGCCGTAGGATTACAGTTAAACAAGCCACGCACAGGCCTTCTCTTAAAGAGCGTCGTACTAAAGCAGCCCAAGGAGTCTCATTACCTGATAGTTCCCAGGCAGAGAGTGACGATAACAAGGACAGTTTGGTCCCTGAGACTGTGACTGAGACTGAGACAGACAAGCAAGTTCCTCCACCGGAGAAGAAAATAGAGAAGCCACTTGAGCGCAAAAAACCTACAAAGCCAGCAAAGCTTCTTGTTGATTTAGCTGATAAAGAGACATGTTCAGACAAGCAAAGAGTTGCAAGAACTGTAATCTTTGGTGGCCTTGTTAATGCTGAGATGGCAGAGGCAGTGCATAGCCGTGTCAAAAAGATTGGCACTGTGTGCTCCGTCAGATATCCCCTCCCCAAAGAGGAGCTTCAACAAAATGGTCTTACCCAGGACGGATGCAGGGCAGAAGCATCAGCTGTTCTCTTTACGAGTGTCAAATCTGCTTGTGCTGCTGTTGCAACACTACATCAGACAGAGATAAAGGGAAATCTCATTTGGGCGCGTCAGCTCGGTGGGGAGGGATCAAAGGCTCAGAAGTGGAAGCTTATTATCCGAAATCTTCCTTTCAAGGCTAAACCTAGTGAAATTAAAGAGGTCTTTTCAGCAGTAGGGTTTGTCTGGGATGTTTTTGTTCCTAAAAATATTGAAACTGGGCTACCTAAGGGGTTTGCATTTGTCAAATTCACGTGTAAGAGAGATGCAGAAAATGCAATACAAAAGTTCAACGGGCACATGTTCAGTAAAAGACCTATAGCTGTAGACTGGGCTGTACCTAAGAATCTCTATAATGGTGCCGCTGATGCCGCCACTGCTCCAGAAGATGGTGAAAAAGATGGAAGTGATGGGGACAGTGATAATAGTAGTGTTGATTTGGAGGAGGTTGATGATGCTGTTGAGAGCCACCAATCTTCAGGAGATGATACTGACAATGATGAGGAGGACGGCAGTAACAAACCGAGTGAATCAGATGCACTGGTGAAAGATGCTGAGACCGATGTGAATTTTGAAGAGGAGGCCGATGTTGCGAGAAAGGTGCTTAAGAACTTGCTTGGGTCTTCAAAAGTAACAATTGCATCTCAGGGTGGAGAGACAGAGGAATCAGATATAAACATACTCGAGGATTCATCAACTAAGCCTGTCGTTGAATCTTCTGGTGTCTCTGAACCTTTGAAATCCAGTAAAACCAAAGAGGCGGCTCCCAAAGAAACGCAGGAAAATGATGATTTCAAGAGAACTGTATTTATAAGCAACATCCCGTTTGATGTTAGCAAGGAGGAAGTCACACAGAGGTTTACCGCATTTGGGCAAGTTGAATCTTTATTCCTAGTTCTCCACCCAGTCACAAAACGACCAAAAGGGACCGCTTTTCTCAAGTTCAAAACAGCAGATGCATCAGATGCAGCCATATCAGCTGCCAGTAGTGCCTCAGGTGTTGGTGTCCTTCTTAAAGGAAGGCAACTGAGCGTTATGAGGGCTGTGGATAAGAAGTCCGCAAAGGACATAGGACTCGAAAAGACAAAGGAGAAGAACATTGACCATCGGAATCTTTATCTTGCTAAGGAAGGTCAGATCCTTGAAGGTACACCTGCTGCTGAGGGTGTGTCTGCAGAAGATATGGACAGGCGACGAAGATTGCATGAAAACAAGATGAAAAAGCTTCAGTCTCCTAACTTCCATGTATCTAAAACGAGGATTGTAATTTATAATTTACCAAAGTCCATGGATGAAAAGCAACTACAGAAGCTCTTAGTCGATGCTGTTACCTCCCGAGCTACAAAGCAGAAGCCAACCATCCGACAGATCAAGTTCTTACAAAACGAGAAGAAGGGTAAAGTTGACACGAAGAACTACTCACGTGGAGTTGCTTTTGTTGAGTTCACCGAGCCTGACCATGCTCTTGTGGCCCTGAGAGTACTTAACAACAATCCTGAGACGTTTGGCCCTCAACATCGTCCCGTTATAGAATTTGCTGTTGATAACGTCCAGAAGCTGAAGGTACACAAAGCTAACCAGCAGCAGCAACGCAATAGATACAATGAATCTAGGGAGCAGCGAGAGAACGGCGAAGCGCAGGGAGAGGACAATCATCCTGGCAATGATCTAAAACGAAGAACGAGGGATGGAGATAACACTGGTTCAGTGGAAGAGAATGCAAACGGGTATAAGAAGAGGAAACCTATGCGCCCACGTGAACAGAGGAGAGAAGAATCAAAACCAGAGGAGAAGAGCAGTCTCTCTGTGAAAGAAGATGCAAGGAACAAGAGGCCTACACGTGCACAAGAAAATACAAAAGAACCGGCTTCAAACCAGAAAGGCCAGTGGAAGAAGAGACAGCAAGATGCTTCTGAGAAACCAGATGAGAAGAAGATATCCAAAGATGTGAGCGATGCGCCAAGAAAGAGAAAGTTTGAGGAGGTTAGAGGCGGAGATAATGTAAACGGGCAAAGGAAGAGAAAGAATCAGAACGAGAGGAAGAAGAAGCAAGGTGGACCCCCCGAGGTTGTGGACAAGCTGGATATGCTGATCGAGCAGTACAGGTCTAAGTTCACCCAGAGCTCAACCAAAACCGGTCCACAGAAACAGAGTTCCGGTCAAGTCAGGAGATGGTTCCAGTCCTGA |
| Protein: MGKNTKKERKDGEEKSQHSAATVCVSGLPYSFTNAQLEEAFSDVGPVRLCFMVTNKGSNEHRGFAFVKFALPEDANRAIELKNGSTVGGRRITVKQATHRPSLKERRTKAAQGVSLPDSSQAESDDNKDSLVPETVTETETDKQVPPPEKKIEKPLERKKPTKPAKLLVDLADKETCSDKQRVARTVIFGGLVNAEMAEAVHSRVKKIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAAVATLHQTEIKGNLIWARQLGGEGSKAQKWKLIIRNLPFKAKPSEIKEVFSAVGFVWDVFVPKNIETGLPKGFAFVKFTCKRDAENAIQKFNGHMFSKRPIAVDWAVPKNLYNGAADAATAPEDGEKDGSDGDSDNSSVDLEEVDDAVESHQSSGDDTDNDEEDGSNKPSESDALVKDAETDVNFEEEADVARKVLKNLLGSSKVTIASQGGETEESDINILEDSSTKPVVESSGVSEPLKSSKTKEAAPKETQENDDFKRTVFISNIPFDVSKEEVTQRFTAFGQVESLFLVLHPVTKRPKGTAFLKFKTADASDAAISAASSASGVGVLLKGRQLSVMRAVDKKSAKDIGLEKTKEKNIDHRNLYLAKEGQILEGTPAAEGVSAEDMDRRRRLHENKMKKLQSPNFHVSKTRIVIYNLPKSMDEKQLQKLLVDAVTSRATKQKPTIRQIKFLQNEKKGKVDTKNYSRGVAFVEFTEPDHALVALRVLNNNPETFGPQHRPVIEFAVDNVQKLKVHKANQQQQRNRYNESREQRENGEAQGEDNHPGNDLKRRTRDGDNTGSVEENANGYKKRKPMRPREQRREESKPEEKSSLSVKEDARNKRPTRAQENTKEPASNQKGQWKKRQQDASEKPDEKKISKDVSDAPRKRKFEEVRGGDNVNGQRKRKNQNERKKKQGGPPEVVDKLDMLIEQYRSKFTQSSTKTGPQKQSSGQVRRWFQS |